Scatter plot
We’ve added an option to view structures in a scatter plot, sorted by user-selected score terms. Navigate to a collection with multiple structures, click the ‘Structure Viewer’ button, and select ‘Scatter Plot’. …more
Improvements to DDG
We’ve simplified the DDG workflow to be the same as Actions, with a selector chosen within the DDG tab. The DDG table is now scrollable, making it much more responsive with large selections. We’ve also implemented ‘dirty’ and ‘clean’ states in DDG, meaning selections that are made before a result comes back won’t be reset when that result comes back, or when a different tab is switched to. This will be coming to Actions in the next release.
Collection comparison
You can now compare structures and sequences between any two (or more) collections directly in CAD. Previously this was not possible, and required download of sequences and/or structures for viewing in other software. …more
Superpose structures
We’ve added a feature that allows you to superpose structures on top of one another over a specific region of interest. This is useful for comparing regions of interest after running an Action that alters the protein backbone. For more information, navigate to Support using the dropdown at the upper right, and search for “Superpose”. …more
Performance improvements and collection filtering
We’ve drastically improved performance when viewing large collections by implementing virtual scrolling. You will see a much faster and more responsive UI when dealing with large collections. Additionally, we have implemented filtering within collections. Click the ‘Selected’ or ‘Loaded in viewer’ links above the collection table to filter by each option.
Product shortcuts
To make navigation between Cyrus products easier, we’ve included an app dropdown at the top right of CAD. Contained in this dropdown are links to our support site, Homology Modeling, and CAD. In HM, click ‘Products’ when in projects view, or the app icon when in a project to see the same dropdown.